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Received：11 October 2021，
Revised：2022-1-27，
Accepted：03 February 2022，
Published：16 December 2022
移动端阅览
目的
2
肠胃镜诊断一直被认为是检测及预防结直肠癌的金标准，但当前的临床检查中仍存在一定的漏诊概率，基于深度学习的肠胃内窥镜分割方法可以帮助医生准确评估癌前病变，对诊断和干预治疗都有积极作用。然而提高目标分割的准确性仍然是一项具有挑战性的工作，针对这一问题，本文提出一种基于双层编—解码结构的算法。
方法
2
本文算法由上、下游网络构成，创新性地利用上游网络训练产生注意力权重图，对下游网络解码过程中的特征图产生注意力引导，使分割模型更加注重目标区域；提出子空间通道注意力结构，在跨越连接中提取多分辨率下的跨通道信息，可以有效细化分割边缘；最终输出添加残差结构防止网络退化。
结果
2
在公共数据集CVC-ClinicDB(Colonoscopy Videos Challenge-ClinicDataBase)和Kvasir-Capsule上进行测试，采用Dice相似系数(Dice similariy coefficient，DSC)、均交并比(mean intersection over union，mIoU)、精确率(precision)以及召回率(recall)为评价指标，在两个数据集上的DSC分别达到了94.22%和96.02%。进一步将两个数据集混合，测试了算法在跨设备图像上的鲁棒性，其中DSC提升分别达到17%—20%，在没有后处理的情况下，相较其他先进模型(state-of-the-art，SOTA)，如U-Net在DSC、mIoU以及recall上分别取得了1.64%、1.41%和2.54%的提升，与ResUNet++的对比中，在DSC以及recall指标上分别取得了2.23%和9.87%的提升，与SFA (selective feature aggregation network)、PraNet和TransFuse等算法相比，在上述评价指标上也均有显著提升。
结论
2
本文算法可以有效提高医学图像分割效果，并且对小目标分割、边缘分割具有更高的准确率。
Objective
2
Adenomatous polyp is demonstrated as the early manifestation of colorectal cancer. Early intervention is an effective way to prevent colorectal cancer. Current gastroscopy has been regarded as the "gold standard" for detection and prevention of colorectal cancer. However
a certain probability of missed diagnosis is still existed for clinical examination. Deep learning based gastrointestinal endoscopy segmentation method can aid to assess precancerous lesions efficiently
which has a positive effect on diagnosis and clinical intervention. Intestinal polyps are also characterized by small
round and blurred edges
which greatly increase the difficulty of semantic segmentation. Our research is focused on developing an improved algorithm based on the double-layer encoder-decode structure.
Method
2
Our algorithm comprises of upstream and downstream architectures. The attention weight graph generated by the upstream network training is melted into the decoding part of the downstream network. 1) To promote effective network for target area in the image
the generated attention guidance is clarified to the feature map in the decoding process. The background-area-ignored model can be paid more attention to the segmentation contexts
which has a significant effect on small target recognition in semantic segmentation. 2) The edge extraction issue is concerned as well. Due to the similarity of intestinal wall and polyp mucous membrane
the segmentation target edge is blurred. It is essential to strengthen the edge extraction ability of the model and obtain more accurate segmentation results as well. In order to improve the segmentation ability of polyp target boundary
subspace channel attention is integrated into the cross-connection portion of the downstream network for extracting cross-channel information at multi-resolution and refining the edges. Unlike the convolution operation
a self-attention mechanism is involved in. Its ability to model remote dependencies provides an infinite receptive field for the application of visual models. However
traditional attention mechanism brings a huge amount of additional computational overhead. To realize the refine edge effect
the introduction of lightweight subspace channel attention mechanism can feature each space division
reduce the amount of calculation
learn the attention of multiple features
and get the attention of the fusion feature maps. We conduct tests performed on the public datasets Colonoscopy Videos Challenge-ClinicDataBase(CVC-ClinicDB) and Kvasir-Capsule. The CVC-ClinicDB dataset is used to the image data of intestinal polyps collected by conventional colonoscopy and there are 612 pictures in total
while Kvasir-Capsule dataset tends to the image data of polyps collected by Capsule gastroscopy and there are 55 pictures in total. A big gap needs to be bridged in imaging although the same kinds of targets are collected. At the same time
to further prove the robustness of this algorithm
our tests are carried out on the ultrasound nerve segmentation dataset
which has 5 633 ultrasound images of the brachial plexus taken by the imaging surgeon. The resolution of all images are set to 224×224 pixels and it can be randomly scrambled
divided into training set
verification set and test set according to the ratio of 6∶2∶2 and trained on a single GTX 1080Ti GPU. Our saliency network is implemented in Pytorch. In the experiment
binary cross entropy loss function(BCE loss) and Dice loss are proportionally mixed to construct a new Loss function
which has better performance for semantic segmentation of dichotomies. The Adam optimizer is used as well. The initial learning rate is 0.000 3 and the learning rate attenuation is set.
Result
2
The Dice similariy coefficient(DCS)
mean intersection over union(mIoU)
precision and recall are used as the quantitative evaluation metrics
and these metrics are all between 0 and 1. The higher of the index is
the segmentation performance of the model is better. The experimental results showed that the DCS of our model on CVC-ClinicDB and Kvasir-Capsule datasets reached 94.22% and 96.02%
respectively. Compared with U-Net
our DCS
mIoU
precision and recall is increased by 1.89%
2.42%
1.04%
1.87% of each in CVC-ClinicDB dataset and 1.06%
1.9%
0.4%
1.58% in Kvasir-Capsule dataset. The robustness of our algorithm on cross-device images is tested further by mixing the two data sets. Among them
DSC is increased by 17% to 20%
Compared with U-Net
the DCS of our model is increased by 16.73% in CVC-KC dataset (trained on CVC-ClinicDB and tested on Kvasir-Capsule) and 1% in KC-CVC dataset (trained on Kvasir-Capsule and tested on CVC-ClinicDB).
Conclusion
2
We propose an attention segmentation model with dual encode-decoder architecture. Our algorithm can improve the effect of medical image segmentation effectively
and has higher accuracy for small target segmentation and edge segmentation on improving colorectal cancer screening strategies.
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