Objective

2

Images-based segmentation of pulmonary anatomy has been set up the anatomical structures to formulate rapid and targeted diagnostic information. The purpose of pulmonary anatomy segmentation has been associated to a pixel in an image with an anatomical structure without the need for manual initialization. A lots of supervised deep learning image segmentation have been illustrated for segmenting regions of interest in pulmonary CT(computer tomography) images. The medical image segmentation has greatly relied on high-quality labeled medical image data

CT images-based lung anatomy labeled data has been insufficient adopted due to the lack of expert annotation of regions of interest and the lack of infrastructure and standards for sharing labeled data. Most of pulmonary CT annotation datasets have focused on thoracic cancer

pulmonary nodules

tuberculosis

pneumonia and lung segmentation. A dataset of pulmonary CT/CTA(computer tomography/computer tomography angiography) scan images with labels has facilitated the evolvement of pulmonary anatomical structure segmentation algorithms. The dataset has been evaluated the performance of state-of-the-art pulmonary anatomy structure segmentation methods for chest CT scans. It has been difficult to compare various algorithms for pulmonary anatomy structure segmentation. Different methods have been evaluated on different datasets using different evaluation measures in common. The related dataset has implemented a dataset of chest CT scans to identify varying abnormalities based on the reference standards in the context of airway

lung parenchyma

lobe and pulmonary artery. The vein segmentations have been established. The dataset has a unique calculation to compare pulmonary anatomy structure algorithms via the comparison all methods against the reference standard baseline.

Method

2

A sum of 67 sets of CT/CTA images of the pulmonary have labeled in this dataset including 24 sets of CT images and 43 sets of CTA images via a total of 26 157 slices images. Each set of CT/CTA images have labeled for airway

lung parenchyma

lobe

pulmonary artery and vein. Multi-channel images have represented a variety of regular-based clinical scanners based on a reconstructed mediastinal window algorithm. The medical image-based dataset has been annotated and verified via. Manual corrections have annotated using internal software funded by the Key Laboratory of Medical Imaging Intelligent Computing

Ministry of Education.

Result

2

Part of dataset representative segmentation tasks have been used via pulmonary CT anatomical structure segmentation (conference details: the medical image challenge competition held during the 4th International Symposium on Image Computing and Digital Medicine (ISICDM) in Shenyang

China). The representative dataset has included 10 groups of CT and CTA in the training dataset and 5 groups of test dataset. The challenge competition has also offered a platform for evaluating model performance of pulmonary blood vessels

airways and lung parenchyma. The result of segmentation and the effect of 3D reconstruction have evaluated by Dice coefficients

over-segmentation rate

under-segmentation rate and medical and algorithmic industry experts.

Conclusion

2

Four parts of labeled image datasets have been used as a pulmonary CT dataset. This dataset has labeled using different colored pixels and saved respectively for different pulmonary anatomies structure. The annotated data have been re-formatted to ensure easy access. The location of the markers in color pixels has been displayed via 25 000 labeled sliced images dataset using the image format of the raw data. All annotated images from the digital imaging and communications in medicine (DICOM) format to portable network graphics (PNG) images has been converted based on standard DICOM data. The chest CT image dataset has provided valid annotated data via DICOM-based sensitive information re-movement. First each set of CT/CTA has labeled with 4 different target region categories in the context of airway

lung parenchyma

lobe and pulmonary artery and vein to complement the anatomical structure of CT/CTA image dataset of the pulmonary. Next

a partially representative dataset has been and the have verified by the challenge competition. Lastly

clear and intuitive 3-dimensional visualized structural images have been reconstructed for the acquisition of each anatomical structure of the pulmonary segmented via CT/CTA images to assist in the diagnosis of pulmonary diseases. First

this dataset has not annotated lung segments. It has been difficult to obtain that the invisibility of lung segment boundaries based on targeted and accurate reference segmentation criteria. Second

the annotation data have been basically carried out on healthy images and rarely on lesion images. The most important feature of medical datasets has upgraded the diversity of data. The robustness of image segmentation have been implementing further. Last

manual annotation of medical anatomical structure images have inevitably resulted some errors. Supplementing lung segments markers and improving the diversity of data based on pulmonary CT anatomical structure segmentation algorithms have been implementing further via labeling more lesion images.